lib_pollen

[UID:DEPAB69.LBPLL239.0]
Data
About

This is a reference library of pollen types with information about their size and taxonomic position. NB : the volume data have not been used.

  • Pollen_name = pollen name as used in the different dataset including errors, typos etc...
  • Pollen_type = clean pollen categories to be used (with some groupings)
  • Pollen_familly = Botanical fammily of the pollen species
  • Pollen_code : short code for Pollen_type
  • Polar_ref and equatorial_ref = range of known sizes + letter providing the source of information (see below)
  • p = polar size effectively used (for ranges we used the mean of the extreme values)
  • q = equatorial size
  • vol = volume of the ellipsoid calculated from r & q as 4/3 * r/2 *(q/2)^2
  • r = mean radius used by louis to calculate the volume as a sphere
  • vol_r = volume used by Louis based on r

Sources for the pollen sizes (from the scientific report of DEPAB1) a – Source : Pollens de plantes mellifères d'Europe
b- Source : "http://www-saps.plantsci.cam.ac.uk/pollen/" c – Source : "http://journals.tubitak.gov.tr/botany/issues/bot-11-35-2/bot-35-2-5-0906-70.pdf"
d – Source : "http://journals.tubitak.gov.tr/botany/issues/bot-99-23-3/bot-23-3-3-97003.pdf"
e – Source : "http://nhm.openrepository.com/nhm/bitstream/10141/12605/1/Tweddle_Edwards_Fieller_Multivariate.pdf"
f – Source : "http://www.geo.arizona.edu/palynology/pid00042.html"
g – Source : "http://www.landesmuseum.at/pdf_frei_remote/PHY_20_3_4_0307-0323.pdf"
h – Source : banque de données du CARI
n - Noa pers.comm.e-mail 4/2/2015 = h Note – Lorsque la dimension équatoriale n'est pas indiquée, le pollen peut être considéré comme sphérique

Metadata

Column Metadata

Columns

Column Description Datatype Descriptor
equatorial_ref
Range of known sizes + letter providing the source of information Sources for the pollen sizes (from the scientific report of DEPAB1) a – Source : Pollens de plantes mellifères d'Europe b- Source : "http://www-saps.plantsci.cam.ac.uk/pollen/" c – Source : "http://journals.tubitak.gov.tr/botany/issues/bot-11-35-2/bot-35-2-5-0906-70.pdf" d – Source : "http://journals.tubitak.gov.tr/botany/issues/bot-99-23-3/bot-23-3-3-97003.pdf" e – Source : "http://nhm.openrepository.com/nhm/bitstream/10141/12605/1/Tweddle_Edwards_Fieller_Multivariate.pdf" f – Source : "http://www.geo.arizona.edu/palynology/pid00042.html" g – Source : "http://www.landesmuseum.at/pdf_frei_remote/PHY_20_3_4_0307-0323.pdf" h – Source : banque de données du CARI n - Noa pers.comm.e-mail 4/2/2015 = h Note – Lorsque la dimension équatoriale n'est pas indiquée, le pollen peut être considéré comme sphérique

String

Default unit
p
Polar size effectively used (for ranges we used the mean of the extreme values)

Decimal (float)

Default unit
polar_ref
Range of known sizes + letter providing the source of information Sources for the pollen sizes (from the scientific report of DEPAB1) a – Source : Pollens de plantes mellifères d'Europe b- Source : "http://www-saps.plantsci.cam.ac.uk/pollen/" c – Source : "http://journals.tubitak.gov.tr/botany/issues/bot-11-35-2/bot-35-2-5-0906-70.pdf" d – Source : "http://journals.tubitak.gov.tr/botany/issues/bot-99-23-3/bot-23-3-3-97003.pdf" e – Source : "http://nhm.openrepository.com/nhm/bitstream/10141/12605/1/Tweddle_Edwards_Fieller_Multivariate.pdf" f – Source : "http://www.geo.arizona.edu/palynology/pid00042.html" g – Source : "http://www.landesmuseum.at/pdf_frei_remote/PHY_20_3_4_0307-0323.pdf" h – Source : banque de données du CARI n - Noa pers.comm.e-mail 4/2/2015 = h Note – Lorsque la dimension équatoriale n'est pas indiquée, le pollen peut être considéré comme sphérique

String

Default unit
Pollen_code
Short code for Pollen_type

String

Default unit
Pollen_familly
Botanical fammily of the pollen species

String

Default unit
Pollen_name
Pollen name as used in the different dataset including errors, typos etc...

String

Default unit
Pollen_type
Clean pollen categories to be used (with some groupings)

String

Default unit
q
Equatorial size

Decimal (float)

Default unit
r
Mean radius used by louis to calculate the volume as a sphere

Decimal (float)

Default unit
vol
Volume of the ellipsoid calculated from r & q as 4/3 * r/2 *(q/2)^2

Decimal (float)

Default unit
vol_r
Volume used by Louis based on r

Decimal (float)

Default unit
Descriptive Measures

Column profiling

Columns

Range Mean Minimum Q1 Median Q3 Maximum Total Missing Zero Blank Distinct Outliers
equatorial_ref
0 - 7
n/a
10-12c
n/a
n/a
n/a
8a
52
27 (51.9%)
0 (0.0%)
0 (0.0%)
15 (28.8%)
n/a
p
2 - 4
30.00
11.0
22.00
30.00
35.00
67.5
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
23 (44.2%)
22 (42.3%)
polar_ref
2 - 9
n/a
11a
n/a
n/a
n/a
>40e
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
31 (59.6%)
n/a
Pollen_code
3 - 3
n/a
ana
n/a
n/a
n/a
vic
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
35 (67.3%)
n/a
Pollen_familly
7 - 15
n/a
Anacardiaceae
n/a
n/a
n/a
unknown
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
29 (55.8%)
n/a
Pollen_name
5 - 28
n/a
Anacardiacées
n/a
n/a
n/a
type rhamnacées
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
51 (98.1%)
n/a
Pollen_type
5 - 14
n/a
Anacardiaceae
n/a
n/a
n/a
unknown
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
35 (67.3%)
n/a
q
1 - 4
30.98
8.0
22.25
30.00
39.38
67.5
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
24 (46.2%)
26 (50.0%)
r
2 - 5
29.569
9.50
21.500
30.000
35.000
50.00
52
5 (9.6%)
0 (0.0%)
0 (0.0%)
22 (42.3%)
19 (36.5%)
vol
6 - 9
20,974.417
368.61
5,548.580
14,137.170
26,299.600
161,031.17
52
0 (0.0%)
0 (0.0%)
0 (0.0%)
27 (51.9%)
26 (50.0%)
vol_r
5 - 8
16,330.984
15.25
5,203.720
10,889.220
22,449.300
65,449.85
52
5 (9.6%)
0 (0.0%)
0 (0.0%)
23 (44.2%)
21 (40.4%)
Quality Measures

Data quality measures

Columns

Completeness Uniqueness Most Common Value Least Common Value
equatorial_ref
48.08%
28.85%
n/a
10-12c
p
100.00%
44.23%
40
22.5
polar_ref
100.00%
59.62%
31a
30b
Pollen_code
100.00%
67.31%
ast
ana
Pollen_familly
100.00%
55.77%
Asteraceae
Anacardiaceae
Pollen_name
100.00%
98.08%
Ronces
Anacardiacées
Pollen_type
100.00%
67.31%
Asteraceae
Anacardiaceae
q
100.00%
46.15%
30
11
r
90.38%
42.31%
n/a
16.75
vol
100.00%
51.92%
22449.3
1425.5
vol_r
90.38%
44.23%
n/a
2460.61
Profiling Charts
Samples

Data samples

Pollen_name
Text
Pollen_type
Text
Pollen_familly
Text
Pollen_code
Text
polar_ref
Text
equatorial_ref
Text
p
Decimal Number
q
Decimal Number
vol
Decimal Number
r
Decimal Number
vol_r
Decimal Number
Anacardiacées
Anacardiaceae
Anacardiaceae
ana
30b
n/a
30
30
14137,17
30
14137,17
Apiacées
Apiaceae
Apiaceae
api
20-25c
10-12c
22,5
11
1425,5
16,75
2460,61
Astéracées
Asteraceae
Asteraceae
ast
26a
25a
26
25
8508,48
25,5
8681,99
Astéracées(type aster)
Asteraceae
Asteraceae
ast
26a
25a
26
25
8508,48
25,5
8681,99
Balsaminacées
Balsaminaceae
Balsaminaceae
bal
33b
n/a
33
33
18816,57
33
18816,57
Borraginacée
Borraginaceae
Borraginaceae
bor
11a
8a
11
8
368,61
9,5
448,92
Brassicacées
Brassicaceae
Brassicaceae
bra
24a – 30h
26a
27
26
9556,72
25
8181,23
Campanulacées
Campanulaceae
Campanulaceae
cam
31a
34a
31
34
18763,69
32,5
17974,16
Campanulcées
Campanulaceae
Campanulaceae
cam
31a
34a
31
34
18763,69
32,5
17974,16
Caprifoliacées
Caprifoliaceae
Caprifoliaceae
cap
30-80n
n/a
55
55
87113,75
n/a
n/a
Centaurée
Centaurea
Asteraceae
cen
31a
30a
31
30
14608,41
30,5
15,25
Centaurées
Centaurea
Asteraceae
cen
31a
30a
31
30
14608,41
30,5
15,25
Céréales
Cereals
Poaceae
cer
>40e
n/a
40
40
33510,32
40
33510,32
Chénopodiacées
Chenopodiaceae
Chenopodiaceae
che
15-28d
15-28d
21,5
21,5
5203,72
21,5
5203,72
Cistacée
Cistaceae
Cistaceae
cis
35b-45a
47a
40
47
46265,19
43,5
43098,92
Cistacées(hélianthème)
Cistaceae
Cistaceae
cis
35b-45a
47a
40
47
46265,19
43,5
43098,92
Cistacées(type hélianthénum)
Cistaceae
Cistaceae
cis
35b-45a
47a
40
47
46265,19
43,5
43098,92
Epilobe
Epilobium
Onagraceae
epi
50h
n/a
50
50
65449,85
50
65449,85
Ericacée
Ericaceae
Ericaceae
eri
29-41a
n/a
35
35
22449,3
35
22449,3
Ericacées
Ericaceae
Ericaceae
eri
29-41a
n/a
35
35
22449,3
35
22449,3
Fruitiers
Fruit trees
Rosaceae
fru
35b
n/a
35
35
22449,3
35
22449,3
Lamiacées
Lamiaceae
Lamiaceae
lam
25-35f
n/a
30
30
14137,17
30
14137,17
Lierre
Hedera elix
Araliaceae
ivy
25-30h
n/a
27,5
27,5
10889,22
27,5
10889,22
non identifié
unknown
unknown
unk
25-30h
n/a
27,5
27,5
10889,22
27,5
10889,22
Properties

Dataset

Unique Identifier

[DEPAB69.LBPLL239.0]

URI

https://app.pollinatorhub.eu/dataset-discovery/parts/DEPAB69.LBPLL239.0

Table Type

File

Licence in

n/a

Columns

11

Rows

52

Data points

572

Published

2024-04-24
Metrics

Total views

109

Total downloads

6