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Unique identifier: | BGDHL178.0.0 |
Title: | B-GOOD Health Monitoring |
Long title: | Dataset from the B-GOOD project, containing data from studies on diseases detected in honey bee colonies. |
Status: | Quality Validated |
Current Version: | v. 1.0 |
Published: | 2025-03-17 |
Reviewed by: | Rubinigg Michael as Data scientist |
Citation proposal: |
B-GOOD Bee Health Data Portal 2025 Report of dataset B-GOOD Health Monitoring, v. 1.0 [BGDHL178.0.0]. EU Pollinator Hub. [2025-08-31] app.pollinatorhub.eu
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Data Quality
Requires major revision
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This document is intended for use by collaborators of the EU Pollinator Hub and may be passed on with the express permission of the leader of the consortium and for the purpose determined by the leader of the consortium.
Document history
Release
Version v. 1.0 released on 2025-03-17. Reviewed by Rubinigg Michael.
Revision
No | Date | Description | Reason |
---|---|---|---|
1 | 2025-03-17 00:03:00 | Initial release. | n/a |
Abbreviations
Executive summary
Data overview:
Data value:
Data description:
interactions.single.section-about.data-overview-application:
Unresolved issues:
Introduction
Material and methods
Data acquisition
No | File | Type | D | M | Arrival | Data points | File size |
---|---|---|---|---|---|---|---|
1 | b-good-pilot-a-results-2020-for-beep-v2.xlsx | Miscellaneous | No | Yes | 2024-10-07 16:10:29 | n/a | 41.16 KiB |
2 | b-good-pilot-b-results-2020-for-wr-v3.xlsx | Miscellaneous | No | Yes | 2024-10-07 16:10:49 | n/a | 20.76 KiB |
3 | b-good-tier-1-results-2021-for-beep-v3.xlsx | Miscellaneous | No | Yes | 2024-10-07 16:10:25 | n/a | 42.36 KiB |
4 | b-good-pilot-b-results-2021-for-wr-v2.xlsx | Miscellaneous | No | Yes | 2024-10-07 16:10:57 | n/a | 23.09 KiB |
5 | b-good-tier-1-results-2022-for-beep.xlsx | Miscellaneous | No | Yes | 2024-10-07 16:10:23 | n/a | 48.54 KiB |
6 | b-good-pilot-b-results-2022-for-wr.xlsx | Miscellaneous | No | Yes | 2024-10-07 16:10:10 | n/a | 24.24 KiB |
7 | b-good disease monitoring_pilot_PREP_MR_241007.csv | CSV - Comma seperated values | Yes | No | 2024-10-10 16:10:29 | 36,912 | 233.42 KiB |
8 | b-good disease monitoring_field_PREP_MR_241007.csv | CSV - Comma seperated values | Yes | No | 2024-10-08 09:10:10 | 49,392 | 333.43 KiB |
9 | b-good-tier-2-results-2021-for-beep-v3.xlsx | Miscellaneous | No | Yes | 2024-10-08 09:10:17 | n/a | 59.33 KiB |
10 | b-good-tier-2-results-2021-for-bsour-v2.xlsx | Miscellaneous | No | Yes | 2024-10-08 09:10:33 | n/a | 22.92 KiB |
11 | b-good-tier-2-results-2021-for-mlu-v2.xlsx | Miscellaneous | No | Yes | 2024-10-08 09:10:42 | n/a | 20.76 KiB |
12 | b-good-tier-2-results-2021-for-sml-v2.xlsx | Miscellaneous | No | Yes | 2024-10-08 10:10:12 | n/a | 19.65 KiB |
13 | b-good-tier-2-results-2021-for-ubern-v3.xlsx | Miscellaneous | No | Yes | 2024-10-08 10:10:20 | n/a | 27.10 KiB |
14 | b-good-tier-2-results-2021-for-wr-v2.xlsx | Miscellaneous | No | Yes | 2024-10-08 10:10:14 | n/a | 19.56 KiB |
15 | b-good-tier-2-results-2022-for-beep-v2.xlsx | Miscellaneous | No | Yes | 2024-10-08 10:10:11 | n/a | 80.10 KiB |
16 | b-good-tier-3-results-2022-for-beep.xlsx | Miscellaneous | No | Yes | 2024-10-08 10:10:49 | n/a | 102.84 KiB |
Data preparation
Data validation
Data analysis
Data description
Dataset
No | Table | Description |
---|---|---|
1 | Pilot study | Data from the tier 1 pilot A and B studies performed in 2020, 2021 and 2022. |
2 | Field study | Data from the tier 2 and tier 3 field studies A and B performed in 2021 and 2022. |
Parameter | Content |
---|---|
interactions.single.uid | BGDHL178.0.0 |
Title | B-GOOD Health Monitoring |
Long title | Dataset from the B-GOOD project, containing data from studies on diseases detected in honey bee colonies. |
Target IRI | https://app.pollinatorhub.eu/dataset-discovery/BGDHL178.0.0 |
interactions.single.section-details.licence | CC BY-NC-ND 4.0 |
DOI | n/a |
Created | 2024-10-07 |
Published | 2025-03-17 |
Contact | n/a |
Keywords | ABPV, AFB, Acute Bee Paralysis Virus, American foulbrood, Apis mellifera, BQCV, Black Queen Cell Virus, CBPV, Chronic Bee Paralysis Virus, DWV A, DWV B, Deformed Wing Virus A, Deformed Wing Virus B, EFB, European foulbrood, Field study, SBV, Sackbrood Virus, honey bee |
Data collection years | n/a |
Regions, the data was collected in | n/a |
Abstract | The dataset contains results from the analysis of the pathogens Deformed Wing Virus A (DWV-A), Deformed Wing Virus B (DWV-B); Acute Bee Paralysis Virus (ABPV), Chronic Bee Paralysis Virus (CBPV), Black Queen Cell Virus (BQCV), Sackbrood Virus (SBV), Paenibacillus larvae; Melissococcus plutonius; Nosema apis; Nosema ceranae; Malpighamoeba mellificae; Varroa destructor in honey bee samples collected in spring, summer and autumn of 2020, 2021 and 2022 in different locations. It was published by Schäfer MO (FLI) on the B-GOOD Bee Health Data Portal as part of the B-GOOD project (grant agreement 817622), funded under the EU Horizon 2020 Research and Innovation Programme. |
Parameter | Content |
---|---|
Name | B-GOOD Bee Health Data Portal |
Url | |
Acronym | B-GOOD |
IRI | https://app.pollinatorhub.eu/data-providers/b-good-bee-health-data-portal |
Address | https://b-good-project.eu |
Country | Belgium |
Contact | b-good-project.eu |
Description | Project funded by the EU Horizon 2020 Research and Innovation Programme under grant agreement No 817622. Project website: https://b-good-project.eu |
Tables
Pilot study
Parameter | Content |
---|---|
Unique identifier | BGDHL178.PLTST363.0 |
Name | Pilot study |
Target IRI | https://app.pollinatorhub.eu/dataset-discovery/parts/BGDHL178.PLTST363.0 |
Table Type | File |
Licence | CC BY-NC-ND 4.0 |
Description |
Data from the tier 1 pilot A and B studies performed in 2020, 2021 and 2022. |
Metadata
Column Name | Column Description | Datatype | Descriptor | Unit |
---|---|---|---|---|
dataset |
Name of the dataset on the Bee Health Data Portal from which the data was obtained. |
String | Text [0.0.TEXTA315] | n/a |
StudyTierLevel |
Tier level of the study. |
String | Text [0.0.TEXTA315] | n/a |
StudyName |
Name of the study. |
String | Text [0.0.TEXTA315] | n/a |
year |
Calendar year in which the data was acquired. |
Integer number | dwc:year [0.0.YEARA340] | year |
organisation |
Not specified by the data provider. Organisation appearing in the name of the dataset. |
String | Text [0.0.TEXTA315] | n/a |
V |
Not specified by the data provider. V number appearing in the name of the dataset. |
String | Text [0.0.TEXTA315] | n/a |
SampleID |
Unique identifier of the sample. |
String | dwc:materialSampleID [0.0.MTRLS489] | n/a |
partner |
Not specified by the data provider. Presumably the name of the consortium partner, who the provided the data. |
String | Text [0.0.TEXTA315] | n/a |
season |
Not specified by the data provider. Presumably the season in which the sample was collected. |
String | pms:season [0.0.SSONA466] | n/a |
DWVA |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus A (DWV A). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
DWVA_Cat |
Attribute referring to column DWVA, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
DWVA_Notes |
Annotations referring to column DWVA. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
DWVB |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus B (DWV-B). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
DWVB_Cat |
Attribute referring to column DWVB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
DWVB_Notes |
Annotations referring to column DWVB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
ABPV |
The Cq-value (Ct value) for the infection load with the Acute Bee Paralysis Virus (ABPV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
ABPV_Cat |
Attribute referring to column ABPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
ABPV_Notes |
Annotations referring to column ABPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
CBPV |
The Cq-value (Ct value) for the infection load with the Chronic Bee Paralysis Virus (CBPV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
CBPV_Cat |
Attribute referring to column CBPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
CBPV_Notes |
Annotations referring to column CBPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
BQCV |
The Cq-value (Ct value) for the infection load with the Black Queen Cell Virus (BQCV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
BQCV_Cat |
Attribute referring to column BQCV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
BQCV_Notes |
Annotations referring to column BQCV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
SBV |
The Cq-value (Ct value) for the infection load with the Sackbrood Virus (SBV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
SBV_Cat |
Attribute referring to column SBV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
SBV_Notes |
Annotations referring to column SBV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
EFB |
The Cq-value (Ct value) for the infection load witht the causative agent of European Foulbrood of honey bees (EFB), Melissococcus plutonius. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
EFB_Cat |
Attribute referring to column EFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
String | Text [0.0.TEXTA315] | n/a |
EFB_Notes |
Annotations referring to column EFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
AFB |
The Cq-value (Ct value) for the infection load witht the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
AFB_Cat |
Attribute referring to column AFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
String | Text [0.0.TEXTA315] | n/a |
AFB_Notes |
Annotations referring to column AFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
NosemaApis |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema apis. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
NosemaApis_Notes |
Annotations referring to column NosemaApis. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
NosemaCeranae |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema ceranae. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
NosemaCeranae_Notes |
Annotations referring to column NosemaCeranae. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
VarroaBees |
Attribute referring to column VarroaInfestation: Y (Yes) if 100 bees or more were sampled; N (No) if less than 100 bees were samples. |
String | Text [0.0.TEXTA315] | n/a |
VarroaInfestation |
Varroa infestation, measured as Varroa infestation rate of adult bees. |
Decimal number | pms:varroaInfestationOfAdultBees [0.0.VRRNF468] | mites (100 bees)-1 |
Varroa_Notes |
Annotations referring to column VarroaInfestation. |
String | Text [0.0.TEXTA315] | n/a |
AFBcfu |
Not specified by the data provider. Presumably colony forming units, counted appearing in microbiological assays, which are used for the detection of the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Integer number | Integer [0.0.NTGER313] | n/a |
AFBcfu_Notes |
Annotations referring to column AFBcfu. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
NosemaSpores |
Number of the causative agents of Nosemosis of honey bees (Nosema apis, Nosema ceranae), exprtessed in spores per animal. |
Integer number | Integer [0.0.NTGER313] | spores animal-1 |
NosemaSpores_Notes |
Annotations referring to column NosemaSpores. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file); <25000 (less than 25000 spores per animal). |
String | Text [0.0.TEXTA315] | n/a |
Malpighamoeba |
The Cq-value (Ct value) for the infection load witht the causative agent of amoeba disease of honey bees, Malpighamoeba mellificae. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
Malpighamoeba_CT |
Not specified by the data provider. |
String | Text [0.0.TEXTA315] | n/a |
Malpighamoeba_Notes |
Annotations referring to column Malpighamoeba. |
String | Text [0.0.TEXTA315] | n/a |
RecordNotes |
Notes added by the data provider to specific records in the raw data. |
String | Text [0.0.TEXTA315] | n/a |
Metadata of individual tables can be found in Annex 1.
Descriptive measures
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
dataset | 33 - 39 | n/a | B-GOOD Pilot… | n/a | n/a | n/a | Tier1 Pilot… | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 6 ( 0.8% ) |
StudyTierLevel | 6 - 6 | n/a | Tier 1 | n/a | n/a | n/a | Tier 1 | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) |
StudyName | 7 - 7 | n/a | Pilot A | n/a | n/a | n/a | Pilot B | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
year | 4 - 4 | 2,021.0 | 2,020 | 2,020 | 2,021 | 2,022 | 2,022 | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
organisation | 2 - 4 | n/a | BEEP | n/a | n/a | n/a | WR | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
V | 0 - 2 | n/a | V2 | n/a | n/a | n/a | V3 | 769 | 256 ( 33.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
SampleID | 7 - 17 | n/a | ABPLTDAX | n/a | n/a | n/a | no label | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 766 ( 99.6% ) |
partner | 2 - 5 | n/a | INRAE | n/a | n/a | n/a | WR | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 10 ( 1.3% ) |
season | 6 - 6 | n/a | autumn | n/a | n/a | n/a | summer | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
DWVA | 5 - 5 | 30.595 | 10.61 | 28.72 | 31.71 | 34.51 | 39.62 | 769 | 634 ( 82.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 132 ( 17.2% ) |
DWVA_Cat | 1 - 2 | n/a | H | n/a | n/a | n/a | ND | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.7% ) |
DWVA_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 135 ( 17.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
DWVB | 4 - 5 | 21.900 | 5.95 | 15.2325 | 23.335 | 27.98 | 37.94 | 769 | 21 ( 2.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 655 ( 85.2% ) |
DWVB_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
DWVB_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 748 ( 97.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
ABPV | 5 - 5 | 34.521 | 13.17 | 33.22 | 35.255 | 37.0275 | 40.00 | 769 | 433 ( 56.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 288 ( 37.5% ) |
ABPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 265 ( 34.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.7% ) |
ABPV_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 336 ( 43.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
CBPV | 5 - 5 | 35.681 | 15.26 | 34.185 | 36.26 | 38.1125 | 40.00 | 769 | 493 ( 64.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 212 ( 27.6% ) |
CBPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 265 ( 34.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.7% ) |
CBPV_Notes | 0 - 13 | n/a | >40,00 | n/a | n/a | n/a | not availabl… | 769 | 276 ( 35.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
BQCV | 4 - 5 | 22.912 | 8.67 | 21.015 | 23.49 | 25.425 | 36.18 | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 588 ( 76.5% ) |
BQCV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | M | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
BQCV_Notes | 0 - 0 | n/a | n/a | n/a | n/a | 769 | 769 ( 100.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) | ||
SBV | 1 - 5 | 24.334 | 0 | 21.07 | 26.09 | 28.96 | 37.92 | 769 | 2 ( 0.3% ) | 1 ( 0.1% ) | 0 ( 0.0% ) | 654 ( 85.0% ) |
SBV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
SBV_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 767 ( 99.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
EFB | 4 - 6 | 31.1580 | 19.15 | 25.1 | 33.675 | 35.3 | 37.17 | 769 | 746 ( 97.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 24 ( 3.1% ) |
EFB_Cat | 0 - 2 | n/a | H | n/a | n/a | n/a | ND | 769 | 485 ( 63.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 6 ( 0.8% ) |
EFB_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 23 ( 3.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
AFB | 2 - 6 | 37.5437 | 33.94 | 36.78 | 37.37 | 38.49 | 40 | 769 | 738 ( 96.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 29 ( 3.8% ) |
AFB_Cat | 0 - 2 | n/a | L | n/a | n/a | n/a | ND | 769 | 485 ( 63.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
AFB_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 516 ( 67.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
NosemaApis | 5 - 5 | 27.780 | 27.78 | n/a | n/a | n/a | 27.78 | 769 | 768 ( 99.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
NosemaApis_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 1 ( 0.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
NosemaCeranae | 2 - 6 | 25.8414 | 14.26 | 21.725 | 24.4 | 31.025 | 36.45 | 769 | 515 ( 67.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 245 ( 31.9% ) |
NosemaCeranae_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 254 ( 33.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
VarroaBees | 1 - 2 | n/a | N | n/a | n/a | n/a | Y | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
VarroaInfestation | 1 - 11 | 2.2693610600 | 0 | 0 | 0 | 1.87802759 | 176.9230769 | 769 | 7 ( 0.9% ) | 418 ( 54.4% ) | 0 ( 0.0% ) | 205 ( 26.7% ) |
Varroa_Notes | 0 - 2 | n/a | ND | n/a | n/a | n/a | ND | 769 | 762 ( 99.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
AFBcfu | 1 - 1 | 0.0 | 0 | 0 | 0 | 0 | 0 | 769 | 756 ( 98.3% ) | 13 ( 1.7% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
AFBcfu_Notes | 0 - 13 | n/a | ND | n/a | n/a | n/a | unknown | 769 | 13 ( 1.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
NosemaSpores | 5 - 8 | 568,959.2 | 25,000 | 125,000 | 225,000 | 425,000 | 15,275,000 | 769 | 540 ( 70.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 53 ( 6.9% ) |
NosemaSpores_Notes | 0 - 13 | n/a | n/a | n/a | n/a | not availabl… | 769 | 229 ( 29.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) | |
Malpighamoeba | 4 - 11 | 34.461182790 | 20.94 | 31.24 | 35.2 | 38.16 | 40.27 | 769 | 738 ( 96.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 32 ( 4.2% ) |
Malpighamoeba_CT | 0 - 1 | n/a | N | n/a | n/a | n/a | Y | 769 | 513 ( 66.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Malpighamoeba_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 31 ( 4.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
RecordNotes | 0 - 0 | n/a | n/a | n/a | n/a | 769 | 769 ( 100.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) |
Quality measures
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
dataset |
100.00%
|
0.78%
|
Tier1 Pilot A results 2021 for BEEP | Tier1 Pilot B results 2022 for WR |
StudyTierLevel |
100.00%
|
0.13%
|
Tier 1 | Tier 1 |
StudyName |
100.00%
|
0.26%
|
Pilot A | Pilot B |
year |
100.00%
|
0.39%
|
2021 | 2020 |
organisation |
100.00%
|
0.26%
|
BEEP | WR |
V |
66.71%
|
0.39%
|
V3 | V2 |
SampleID |
100.00%
|
99.61%
|
no label | ATZXSFHM |
partner |
100.00%
|
1.30%
|
WR | INRAe |
season |
100.00%
|
0.39%
|
summer | spring |
DWVA |
17.56%
|
17.17%
|
n/a | 14.07 |
DWVA_Cat |
100.00%
|
0.65%
|
N | H |
DWVA_Notes |
82.44%
|
0.26%
|
negative | n/a |
DWVB |
97.27%
|
85.18%
|
n/a | 32.65 |
DWVB_Cat |
100.00%
|
0.52%
|
H | N |
DWVB_Notes |
2.73%
|
0.26%
|
n/a | negative |
ABPV |
43.69%
|
37.45%
|
n/a | 38.72 |
ABPV_Cat |
65.54%
|
0.65%
|
n/a | H |
ABPV_Notes |
56.31%
|
0.39%
|
n/a | negative |
CBPV |
35.89%
|
27.57%
|
n/a | 31.85 |
CBPV_Cat |
65.54%
|
0.65%
|
n/a | H |
CBPV_Notes |
64.11%
|
0.52%
|
n/a | >40,00 |
BQCV |
100.00%
|
76.46%
|
25.23 | 11.49 |
BQCV_Cat |
100.00%
|
0.39%
|
H | L |
BQCV_Notes |
0.00%
|
0.13%
|
n/a | n/a |
SBV |
99.74%
|
85.05%
|
26.1 | 28.81 |
SBV_Cat |
100.00%
|
0.52%
|
M | N |
SBV_Notes |
0.26%
|
0.26%
|
n/a | negative |
EFB |
2.99%
|
3.12%
|
n/a | 35.07 |
EFB_Cat |
36.93%
|
0.78%
|
n/a | H |
EFB_Notes |
97.01%
|
0.39%
|
not available | n/a |
AFB |
4.03%
|
3.77%
|
n/a | 33.94 |
AFB_Cat |
36.93%
|
0.52%
|
n/a | ND |
AFB_Notes |
32.90%
|
0.26%
|
n/a | negative |
NosemaApis |
0.13%
|
0.26%
|
n/a | 27.78 |
NosemaApis_Notes |
99.87%
|
0.39%
|
negative | n/a |
NosemaCeranae |
33.03%
|
31.86%
|
n/a | 15.99 |
NosemaCeranae_Notes |
66.97%
|
0.39%
|
not available | negative |
VarroaBees |
100.00%
|
0.39%
|
Y | ND |
VarroaInfestation |
99.09%
|
26.66%
|
0 | 4.226804124 |
Varroa_Notes |
0.91%
|
0.26%
|
n/a | ND |
AFBcfu |
1.69%
|
0.26%
|
0 | 0 |
AFBcfu_Notes |
98.31%
|
0.52%
|
not available | unknown |
NosemaSpores |
29.78%
|
6.89%
|
150000 | 9000000 |
NosemaSpores_Notes |
70.22%
|
0.52%
|
not available | <25000 |
Malpighamoeba |
4.03%
|
4.16%
|
n/a | 37.41 |
Malpighamoeba_CT |
33.29%
|
0.39%
|
n/a | Y |
Malpighamoeba_Notes |
95.97%
|
0.39%
|
not available | n/a |
RecordNotes |
0.00%
|
0.13%
|
n/a | n/a |
Changes made to preparatory file
Changes made to data
Unresolved issues
Field study
Parameter | Content |
---|---|
Unique identifier | BGDHL178.FLDST364.0 |
Name | Field study |
Target IRI | https://app.pollinatorhub.eu/dataset-discovery/parts/BGDHL178.FLDST364.0 |
Table Type | File |
Licence | CC BY-NC-ND 4.0 |
Description |
Data from the tier 2 and tier 3 field studies A and B performed in 2021 and 2022. |
Metadata
Column Name | Column Description | Datatype | Descriptor | Unit |
---|---|---|---|---|
dataset |
Name of the dataset on the Bee Health Data Portal from which the data was obtained. |
String | Text [0.0.TEXTA315] | n/a |
StudyTierLevel |
Tier level of the study. |
String | Text [0.0.TEXTA315] | n/a |
StudyName |
Name of the study. |
String | Text [0.0.TEXTA315] | n/a |
year |
Calendar year in which the data was acquired. |
Integer number | dwc:year [0.0.YEARA340] | year |
organisation |
Not specified by the data provider. Organisation appearing in the name of the dataset. |
String | Text [0.0.TEXTA315] | n/a |
V |
Not specified by the data provider. V number appearing in the name of the dataset. |
String | Text [0.0.TEXTA315] | n/a |
SampleID |
Unique identifier of the sample. |
String | dwc:materialSampleID [0.0.MTRLS489] | n/a |
partner |
Not specified by the data provider. Presumably the name of the consortium partner, who the provided the data. |
String | Text [0.0.TEXTA315] | n/a |
season |
Not specified by the data provider. Presumably the season in which the sample was collected. |
String | pms:season [0.0.SSONA466] | n/a |
DWVA |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus A (DWV-A). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
DWVA_Cat |
Attribute referring to column DWVA, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
DWVA_Notes |
Annotations referring to column DWVA. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
DWVB |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus B (DWV-B). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
DWVB_Cat |
Attribute referring to column DWVB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
DWVB_Notes |
Annotations referring to column DWVB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
ABPV |
The Cq-value (Ct value) for the infection load with the Acute Bee Paralysis Virus (ABPV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
ABPV_Cat |
Attribute referring to column ABPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
ABPV_Notes |
Annotations referring to column ABPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
CBPV |
The Cq-value (Ct value) for the infection load with the Chronic Bee Paralysis Virus (CBPV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
CBPV_Cat |
Attribute referring to column CBPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
CBPV_Notes |
Annotations referring to column CBPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
BQCV |
The Cq-value (Ct value) for the infection load with the Black Queen Cell Virus (BQCV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
BQCV_Cat |
Attribute referring to column BQCV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
BQCV_Notes |
Annotations referring to column BQCV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
SBV |
The Cq-value (Ct value) for the infection load with the Sackbrood Virus (SBV). |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
SBV_Cat |
Attribute referring to column SBV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
String | Text [0.0.TEXTA315] | n/a |
SBV_Notes |
Annotations referring to column SBV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
EFB |
The Cq-value (Ct value) for the infection load witht the causative agent of European Foulbrood of honey bees (EFB), Melissococcus plutonius. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
EFB_Cat |
Attribute referring to column EFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
String | Text [0.0.TEXTA315] | n/a |
EFB_Notes |
Annotations referring to column EFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
AFB |
The Cq-value (Ct value) for the infection load witht the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
AFB_Cat |
Attribute referring to column AFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
String | Text [0.0.TEXTA315] | n/a |
AFB_Notes |
Annotations referring to column AFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
NosemaApis |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema apis. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
NosemaApis_Notes |
Annotations referring to column NosemaApis. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
NosemaCeranae |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema ceranae. |
Decimal number | pms:quantificationCycle [0.0.QNTFC467] | no. |
NosemaCeranae_Notes |
Annotations referring to column NosemaCeranae. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
VarroaBees |
Attribute referring to column VarroaInfestation: Y (Yes) if 100 bees or more were sampled; N (No) if less than 100 bees were samples. |
String | Text [0.0.TEXTA315] | n/a |
VarroaInfestation |
Varroa infestation, measured as Varroa infestation rate of adult bees. |
Decimal number | pms:varroaInfestationOfAdultBees [0.0.VRRNF468] | mites (100 bees)-1 |
Varroa_Notes |
Annotations referring to column VarroaInfestation. |
String | Text [0.0.TEXTA315] | n/a |
AFBcfu |
Not specified by the data provider. Presumably colony forming units, counted appearing in microbiological assays, which are used for the detection of the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Integer number | Integer [0.0.NTGER313] | n/a |
AFBcfu_Notes |
Annotations referring to column AFBcfu. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file). |
String | Text [0.0.TEXTA315] | n/a |
NosemaSpores |
Number of the causative agents of Nosemosis of honey bees (Nosema apis, Nosema ceranae), exprtessed in spores per animal. |
Integer number | Integer [0.0.NTGER313] | spores animal-1 |
NosemaSpores_Notes |
Annotations referring to column NosemaSpores. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file); <25000 (less than 25000 spores per animal). |
String | Text [0.0.TEXTA315] | n/a |
Malpighamoeba |
The Cq-value (Ct value) for the infection load witht the causative agent of amoeba disease of honey bees, Malpighamoeba mellificae. |
Decimal number | DecimalNumber [0.0.DCMLN314] | n/a |
Malpighamoeba_CT |
Not specified by the data provider. |
String | Text [0.0.TEXTA315] | n/a |
Malpighamoeba_Notes |
Annotations referring to column Malpighamoeba. |
String | Text [0.0.TEXTA315] | n/a |
RecordNotes |
Notes added by the data provider to specific records in the raw data. |
String | Text [0.0.TEXTA315] | n/a |
Metadata of individual tables can be found in Annex 1.
Descriptive measures
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
dataset | 37 - 41 | n/a | Tier2 Field… | n/a | n/a | n/a | Tier3 Field… | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 8 ( 0.8% ) |
StudyTierLevel | 6 - 6 | n/a | Tier 2 | n/a | n/a | n/a | Tier 3 | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
StudyName | 13 - 13 | n/a | Field study… | n/a | n/a | n/a | Field study… | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
year | 4 - 4 | 2,021.7 | 2,021 | 2,021 | 2,022 | 2,022 | 2,022 | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
organisation | 4 - 4 | n/a | BEEP | n/a | n/a | n/a | BEEP | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) |
V | 0 - 2 | n/a | V2 | n/a | n/a | n/a | V3 | 1,029 | 418 ( 40.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
SampleID | 1 - 14 | n/a | 11D2 | n/a | n/a | n/a | yhgpjdya | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1,025 ( 99.6% ) |
partner | 2 - 13 | n/a | BSOUR | n/a | n/a | n/a | WR | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 16 ( 1.6% ) |
season | 6 - 6 | n/a | autumn | n/a | n/a | n/a | summer | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
DWVA | 4 - 5 | 29.282 | 6.84 | 26.225 | 31.2 | 35.315 | 38.78 | 1,029 | 728 ( 70.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 270 ( 26.2% ) |
DWVA_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
DWVA_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 301 ( 29.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
DWVB | 1 - 11 | 23.782359580 | 5.5 | 17.26 | 25.7 | 30.68 | 38.45 | 1,029 | 26 ( 2.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 835 ( 81.1% ) |
DWVB_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
DWVB_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 1,003 ( 97.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
ABPV | 2 - 5 | 35.598 | 12 | 35.0475 | 37.025 | 38.4175 | 40 | 1,029 | 745 ( 72.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 213 ( 20.7% ) |
ABPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 336 ( 32.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.5% ) |
ABPV_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 284 ( 27.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
CBPV | 2 - 5 | 36.181 | 13.31 | 35.04 | 36.985 | 38.4225 | 40 | 1,029 | 737 ( 71.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 221 ( 21.5% ) |
CBPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 337 ( 32.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.5% ) |
CBPV_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 292 ( 28.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
BQCV | 2 - 6 | 24.8266 | 9.7 | 22.41 | 24.84 | 27.46 | 37.8 | 1,029 | 2 ( 0.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 743 ( 72.2% ) |
BQCV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
BQCV_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 1,027 ( 99.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
SBV | 1 - 11 | 26.404416140 | 0 | 24.2175 | 28.12 | 30.81 | 37.51 | 1,029 | 77 ( 7.5% ) | 4 ( 0.4% ) | 0 ( 0.0% ) | 736 ( 71.5% ) |
SBV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
SBV_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 952 ( 92.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
EFB | 2 - 7 | 34.43597 | 28.42 | 32.4025 | 35.3 | 36.3525 | 37.38 | 1,029 | 1,011 ( 98.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 19 ( 1.8% ) |
EFB_Cat | 0 - 1 | n/a | L | n/a | n/a | n/a | N | 1,029 | 654 ( 63.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
EFB_Notes | 0 - 13 | n/a | ND | n/a | n/a | n/a | not availabl… | 1,029 | 18 ( 1.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
AFB | 2 - 11 | 36.856439390 | 29.61 | 36.17 | 37.13 | 37.48375 | 40 | 1,029 | 996 ( 96.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 33 ( 3.2% ) |
AFB_Cat | 0 - 1 | n/a | L | n/a | n/a | n/a | N | 1,029 | 696 ( 67.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
AFB_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 33 ( 3.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
NosemaApis | 5 - 5 | 22.846 | 17.75 | 19.35 | 21.58 | 26.69 | 32.03 | 1,029 | 1,020 ( 99.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 10 ( 1.0% ) |
NosemaApis_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 9 ( 0.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
NosemaCeranae | 2 - 6 | 25.0779 | 14.42 | 20.52 | 23.26 | 30.445 | 37.23 | 1,029 | 768 ( 74.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 245 ( 23.8% ) |
NosemaCeranae_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 261 ( 25.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
VarroaBees | 0 - 1 | n/a | N | n/a | n/a | n/a | Y | 1,029 | 2 ( 0.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
VarroaInfestation | 1 - 11 | 1.9824686100 | 0 | 0 | 0 | 1.61290322 | 46.90265487 | 1,029 | 2 ( 0.2% ) | 540 ( 52.5% ) | 0 ( 0.0% ) | 300 ( 29.2% ) |
Varroa_Notes | 0 - 2 | n/a | ND | n/a | n/a | n/a | ND | 1,029 | 1,027 ( 99.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
AFBcfu | 1 - 1 | 0.1 | 0 | 0 | 0 | 0 | 1 | 1,029 | 1,008 ( 98.0% ) | 19 ( 1.8% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
AFBcfu_Notes | 0 - 13 | n/a | ND | n/a | n/a | n/a | not availabl… | 1,029 | 21 ( 2.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
NosemaSpores | 5 - 7 | 339,712.4 | 25,000 | 68,750 | 150,000 | 375,000 | 4,150,000 | 1,029 | 803 ( 78.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 47 ( 4.6% ) |
NosemaSpores_Notes | 0 - 13 | n/a | n/a | n/a | n/a | not availabl… | 1,029 | 226 ( 22.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) | |
Malpighamoeba | 4 - 7 | 29.64933 | 9.91 | 23.9275 | 31.63375 | 35.2275 | 42.5 | 1,029 | 947 ( 92.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 79 ( 7.7% ) |
Malpighamoeba_CT | 0 - 1 | n/a | N | n/a | n/a | n/a | Y | 1,029 | 311 ( 30.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Malpighamoeba_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 393 ( 38.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
RecordNotes | 0 - 122 | n/a | these codes… | n/a | n/a | n/a | these codes… | 1,029 | 966 ( 93.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Quality measures
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
dataset |
100.00%
|
0.78%
|
Tier3 Field study B results 2022 for BEEP | Tier2 Field study results 2021 for WR |
StudyTierLevel |
100.00%
|
0.19%
|
Tier 2 | Tier 3 |
StudyName |
100.00%
|
0.19%
|
Field study A | Field study B |
year |
100.00%
|
0.19%
|
2022 | 2021 |
organisation |
100.00%
|
0.10%
|
BEEP | BEEP |
V |
59.38%
|
0.29%
|
n/a | V2 |
SampleID |
100.00%
|
99.61%
|
GB_1 | _467 |
partner |
100.00%
|
1.55%
|
T3Netherlands | T3 Portugal |
season |
100.00%
|
0.29%
|
spring | autumn |
DWVA |
29.25%
|
26.24%
|
n/a | 19.93 |
DWVA_Cat |
100.00%
|
0.39%
|
N | H |
DWVA_Notes |
70.75%
|
0.19%
|
negative | n/a |
DWVB |
97.47%
|
81.15%
|
n/a | 34.57 |
DWVB_Cat |
100.00%
|
0.39%
|
M | N |
DWVB_Notes |
2.53%
|
0.19%
|
n/a | negative |
ABPV |
27.60%
|
20.70%
|
n/a | 35.73 |
ABPV_Cat |
67.35%
|
0.49%
|
N | H |
ABPV_Notes |
72.40%
|
0.29%
|
negative | n/a |
CBPV |
28.38%
|
21.48%
|
n/a | 37.61 |
CBPV_Cat |
67.25%
|
0.49%
|
N | H |
CBPV_Notes |
71.62%
|
0.29%
|
negative | n/a |
BQCV |
99.81%
|
72.21%
|
26.49 | 24.04 |
BQCV_Cat |
100.00%
|
0.39%
|
M | N |
BQCV_Notes |
0.19%
|
0.19%
|
n/a | negative |
SBV |
92.52%
|
71.53%
|
n/a | 33.58 |
SBV_Cat |
100.00%
|
0.39%
|
M | L |
SBV_Notes |
7.48%
|
0.19%
|
n/a | negative |
EFB |
1.75%
|
1.85%
|
n/a | 37.38 |
EFB_Cat |
36.44%
|
0.39%
|
n/a | M |
EFB_Notes |
98.25%
|
0.39%
|
not available | ND |
AFB |
3.21%
|
3.21%
|
n/a | 36.945 |
AFB_Cat |
32.36%
|
0.39%
|
n/a | M |
AFB_Notes |
96.79%
|
0.29%
|
not available | n/a |
NosemaApis |
0.87%
|
0.97%
|
n/a | 21.58 |
NosemaApis_Notes |
99.13%
|
0.29%
|
negative | n/a |
NosemaCeranae |
25.36%
|
23.81%
|
n/a | 21.88 |
NosemaCeranae_Notes |
74.64%
|
0.29%
|
negative | n/a |
VarroaBees |
99.81%
|
0.29%
|
Y | n/a |
VarroaInfestation |
99.81%
|
29.15%
|
0 | 30.86419753 |
Varroa_Notes |
0.19%
|
0.19%
|
n/a | ND |
AFBcfu |
2.04%
|
0.29%
|
0 | 1 |
AFBcfu_Notes |
97.96%
|
0.29%
|
not available | n/a |
NosemaSpores |
21.96%
|
4.57%
|
50000 | 825000 |
NosemaSpores_Notes |
78.04%
|
0.39%
|
ND | <25000 |
Malpighamoeba |
7.97%
|
7.68%
|
n/a | 39.93 |
Malpighamoeba_CT |
69.78%
|
0.29%
|
N | Y |
Malpighamoeba_Notes |
61.81%
|
0.19%
|
negative | n/a |
RecordNotes |
6.12%
|
0.19%
|
n/a | these codes [column SampleID] might be wrong, as they could not be uploaded onto the BEEP app, or there was no code at all |
Changes made to preparatory file
Changes made to data
Unresolved issues
References
There are no sources in the current document.
Annex 1: Table column reports
Table: Pilot study
Column: dataset
Parameter | Content |
---|---|
Column name | dataset |
Description |
Name of the dataset on the Bee Health Data Portal from which the data was obtained. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
dataset | 33 - 39 | n/a | B-GOOD Pilot… | n/a | n/a | n/a | Tier1 Pilot… | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 6 ( 0.8% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
dataset |
100.00%
|
0.78%
|
Tier1 Pilot A results 2021 for BEEP | Tier1 Pilot B results 2022 for WR |
Data Distribution Top 20
Completeness
Uniqueness
Column: StudyTierLevel
Parameter | Content |
---|---|
Column name | StudyTierLevel |
Description |
Tier level of the study. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
StudyTierLevel | 6 - 6 | n/a | Tier 1 | n/a | n/a | n/a | Tier 1 | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
StudyTierLevel |
100.00%
|
0.13%
|
Tier 1 | Tier 1 |
Data Distribution Top 20
Completeness
Uniqueness
Column: StudyName
Parameter | Content |
---|---|
Column name | StudyName |
Description |
Name of the study. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
StudyName | 7 - 7 | n/a | Pilot A | n/a | n/a | n/a | Pilot B | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
StudyName |
100.00%
|
0.26%
|
Pilot A | Pilot B |
Data Distribution Top 20
Completeness
Uniqueness
Column: year
Parameter | Content |
---|---|
Column name | year |
Description |
Calendar year in which the data was acquired. |
Data type | Integer number |
Descriptor | dwc:year [UID:0.0.YEARA340] |
Descriptor description |
A term from the Darwin Core standard:
|
Descriptor target IRI | http://rs.tdwg.org/dwc/terms/year |
Unit | year |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
year | 4 - 4 | 2,021.0 | 2,020 | 2,020 | 2,021 | 2,022 | 2,022 | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
year |
100.00%
|
0.39%
|
2021 | 2020 |
Data Distribution Top 20
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: organisation
Parameter | Content |
---|---|
Column name | organisation |
Description |
Not specified by the data provider. Organisation appearing in the name of the dataset. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
organisation | 2 - 4 | n/a | BEEP | n/a | n/a | n/a | WR | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
organisation |
100.00%
|
0.26%
|
BEEP | WR |
Data Distribution Top 20
Completeness
Uniqueness
Column: V
Parameter | Content |
---|---|
Column name | V |
Description |
Not specified by the data provider. V number appearing in the name of the dataset. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
V | 0 - 2 | n/a | V2 | n/a | n/a | n/a | V3 | 769 | 256 ( 33.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
V |
66.71%
|
0.39%
|
V3 | V2 |
Data Distribution Top 20
Completeness
Uniqueness
Column: SampleID
Parameter | Content |
---|---|
Column name | SampleID |
Description |
Unique identifier of the sample. |
Data type | String |
Descriptor | dwc:materialSampleID [UID:0.0.MTRLS489] |
Descriptor description |
A term from the Darwin Core standard:
|
Descriptor target IRI | http://rs.tdwg.org/dwc/terms/materialSampleID |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SampleID | 7 - 17 | n/a | ABPLTDAX | n/a | n/a | n/a | no label | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 766 ( 99.6% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SampleID |
100.00%
|
99.61%
|
no label | ATZXSFHM |
Completeness
Uniqueness
Column: partner
Parameter | Content |
---|---|
Column name | partner |
Description |
Not specified by the data provider. Presumably the name of the consortium partner, who the provided the data. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
partner | 2 - 5 | n/a | INRAE | n/a | n/a | n/a | WR | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 10 ( 1.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
partner |
100.00%
|
1.30%
|
WR | INRAe |
Data Distribution Top 20
Completeness
Uniqueness
Column: season
Parameter | Content |
---|---|
Column name | season |
Description |
Not specified by the data provider. Presumably the season in which the sample was collected. |
Data type | String |
Descriptor | pms:season [UID:0.0.SSONA466] |
Descriptor description |
[...] any of the four arbitrary divisions of the year, characterized chiefly by differences in temperature, precipitation, amount of daylight, and plant growth [...] |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.SSONA466 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
season | 6 - 6 | n/a | autumn | n/a | n/a | n/a | summer | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
season |
100.00%
|
0.39%
|
summer | spring |
Data Distribution Top 20
Completeness
Uniqueness
Column: DWVA
Parameter | Content |
---|---|
Column name | DWVA |
Description |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus A (DWV A). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVA | 5 - 5 | 30.595 | 10.61 | 28.72 | 31.71 | 34.51 | 39.62 | 769 | 634 ( 82.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 132 ( 17.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVA |
17.56%
|
17.17%
|
n/a | 14.07 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: DWVA_Cat
Parameter | Content |
---|---|
Column name | DWVA_Cat |
Description |
Attribute referring to column DWVA, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVA_Cat | 1 - 2 | n/a | H | n/a | n/a | n/a | ND | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.7% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVA_Cat |
100.00%
|
0.65%
|
N | H |
Data Distribution Top 20
Completeness
Uniqueness
Column: DWVA_Notes
Parameter | Content |
---|---|
Column name | DWVA_Notes |
Description |
Annotations referring to column DWVA. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVA_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 135 ( 17.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVA_Notes |
82.44%
|
0.26%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: DWVB
Parameter | Content |
---|---|
Column name | DWVB |
Description |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus B (DWV-B). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVB | 4 - 5 | 21.900 | 5.95 | 15.2325 | 23.335 | 27.98 | 37.94 | 769 | 21 ( 2.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 655 ( 85.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVB |
97.27%
|
85.18%
|
n/a | 32.65 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: DWVB_Cat
Parameter | Content |
---|---|
Column name | DWVB_Cat |
Description |
Attribute referring to column DWVB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVB_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVB_Cat |
100.00%
|
0.52%
|
H | N |
Data Distribution Top 20
Completeness
Uniqueness
Column: DWVB_Notes
Parameter | Content |
---|---|
Column name | DWVB_Notes |
Description |
Annotations referring to column DWVB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVB_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 748 ( 97.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVB_Notes |
2.73%
|
0.26%
|
n/a | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: ABPV
Parameter | Content |
---|---|
Column name | ABPV |
Description |
The Cq-value (Ct value) for the infection load with the Acute Bee Paralysis Virus (ABPV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ABPV | 5 - 5 | 34.521 | 13.17 | 33.22 | 35.255 | 37.0275 | 40.00 | 769 | 433 ( 56.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 288 ( 37.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
ABPV |
43.69%
|
37.45%
|
n/a | 38.72 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: ABPV_Cat
Parameter | Content |
---|---|
Column name | ABPV_Cat |
Description |
Attribute referring to column ABPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ABPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 265 ( 34.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.7% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
ABPV_Cat |
65.54%
|
0.65%
|
n/a | H |
Data Distribution Top 20
Completeness
Uniqueness
Column: ABPV_Notes
Parameter | Content |
---|---|
Column name | ABPV_Notes |
Description |
Annotations referring to column ABPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ABPV_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 336 ( 43.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
ABPV_Notes |
56.31%
|
0.39%
|
n/a | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: CBPV
Parameter | Content |
---|---|
Column name | CBPV |
Description |
The Cq-value (Ct value) for the infection load with the Chronic Bee Paralysis Virus (CBPV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CBPV | 5 - 5 | 35.681 | 15.26 | 34.185 | 36.26 | 38.1125 | 40.00 | 769 | 493 ( 64.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 212 ( 27.6% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
CBPV |
35.89%
|
27.57%
|
n/a | 31.85 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: CBPV_Cat
Parameter | Content |
---|---|
Column name | CBPV_Cat |
Description |
Attribute referring to column CBPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CBPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 265 ( 34.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.7% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
CBPV_Cat |
65.54%
|
0.65%
|
n/a | H |
Data Distribution Top 20
Completeness
Uniqueness
Column: CBPV_Notes
Parameter | Content |
---|---|
Column name | CBPV_Notes |
Description |
Annotations referring to column CBPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CBPV_Notes | 0 - 13 | n/a | >40,00 | n/a | n/a | n/a | not availabl… | 769 | 276 ( 35.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
CBPV_Notes |
64.11%
|
0.52%
|
n/a | >40,00 |
Data Distribution Top 20
Completeness
Uniqueness
Column: BQCV
Parameter | Content |
---|---|
Column name | BQCV |
Description |
The Cq-value (Ct value) for the infection load with the Black Queen Cell Virus (BQCV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
BQCV | 4 - 5 | 22.912 | 8.67 | 21.015 | 23.49 | 25.425 | 36.18 | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 588 ( 76.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
BQCV |
100.00%
|
76.46%
|
25.23 | 11.49 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: BQCV_Cat
Parameter | Content |
---|---|
Column name | BQCV_Cat |
Description |
Attribute referring to column BQCV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
BQCV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | M | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
BQCV_Cat |
100.00%
|
0.39%
|
H | L |
Data Distribution Top 20
Completeness
Uniqueness
Column: BQCV_Notes
Parameter | Content |
---|---|
Column name | BQCV_Notes |
Description |
Annotations referring to column BQCV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
BQCV_Notes | 0 - 0 | n/a | n/a | n/a | n/a | 769 | 769 ( 100.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
BQCV_Notes |
0.00%
|
0.13%
|
n/a | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: SBV
Parameter | Content |
---|---|
Column name | SBV |
Description |
The Cq-value (Ct value) for the infection load with the Sackbrood Virus (SBV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SBV | 1 - 5 | 24.334 | 0 | 21.07 | 26.09 | 28.96 | 37.92 | 769 | 2 ( 0.3% ) | 1 ( 0.1% ) | 0 ( 0.0% ) | 654 ( 85.0% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SBV |
99.74%
|
85.05%
|
26.1 | 28.81 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: SBV_Cat
Parameter | Content |
---|---|
Column name | SBV_Cat |
Description |
Attribute referring to column SBV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SBV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SBV_Cat |
100.00%
|
0.52%
|
M | N |
Data Distribution Top 20
Completeness
Uniqueness
Column: SBV_Notes
Parameter | Content |
---|---|
Column name | SBV_Notes |
Description |
Annotations referring to column SBV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SBV_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 767 ( 99.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SBV_Notes |
0.26%
|
0.26%
|
n/a | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: EFB
Parameter | Content |
---|---|
Column name | EFB |
Description |
The Cq-value (Ct value) for the infection load witht the causative agent of European Foulbrood of honey bees (EFB), Melissococcus plutonius. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
EFB | 4 - 6 | 31.1580 | 19.15 | 25.1 | 33.675 | 35.3 | 37.17 | 769 | 746 ( 97.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 24 ( 3.1% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
EFB |
2.99%
|
3.12%
|
n/a | 35.07 |
Data Distribution Top 20
Data Distribution Bottom 20
Outliers
Completeness
Uniqueness
Column: EFB_Cat
Parameter | Content |
---|---|
Column name | EFB_Cat |
Description |
Attribute referring to column EFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
EFB_Cat | 0 - 2 | n/a | H | n/a | n/a | n/a | ND | 769 | 485 ( 63.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 6 ( 0.8% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
EFB_Cat |
36.93%
|
0.78%
|
n/a | H |
Data Distribution Top 20
Completeness
Uniqueness
Column: EFB_Notes
Parameter | Content |
---|---|
Column name | EFB_Notes |
Description |
Annotations referring to column EFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
EFB_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 23 ( 3.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
EFB_Notes |
97.01%
|
0.39%
|
not available | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: AFB
Parameter | Content |
---|---|
Column name | AFB |
Description |
The Cq-value (Ct value) for the infection load witht the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFB | 2 - 6 | 37.5437 | 33.94 | 36.78 | 37.37 | 38.49 | 40 | 769 | 738 ( 96.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 29 ( 3.8% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFB |
4.03%
|
3.77%
|
n/a | 33.94 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: AFB_Cat
Parameter | Content |
---|---|
Column name | AFB_Cat |
Description |
Attribute referring to column AFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFB_Cat | 0 - 2 | n/a | L | n/a | n/a | n/a | ND | 769 | 485 ( 63.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFB_Cat |
36.93%
|
0.52%
|
n/a | ND |
Data Distribution Top 20
Completeness
Uniqueness
Column: AFB_Notes
Parameter | Content |
---|---|
Column name | AFB_Notes |
Description |
Annotations referring to column AFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFB_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 769 | 516 ( 67.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFB_Notes |
32.90%
|
0.26%
|
n/a | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: NosemaApis
Parameter | Content |
---|---|
Column name | NosemaApis |
Description |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema apis. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaApis | 5 - 5 | 27.780 | 27.78 | n/a | n/a | n/a | 27.78 | 769 | 768 ( 99.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaApis |
0.13%
|
0.26%
|
n/a | 27.78 |
Data Distribution Top 20
Continuous Data Distribution
Completeness
Uniqueness
Column: NosemaApis_Notes
Parameter | Content |
---|---|
Column name | NosemaApis_Notes |
Description |
Annotations referring to column NosemaApis. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaApis_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 1 ( 0.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaApis_Notes |
99.87%
|
0.39%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: NosemaCeranae
Parameter | Content |
---|---|
Column name | NosemaCeranae |
Description |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema ceranae. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaCeranae | 2 - 6 | 25.8414 | 14.26 | 21.725 | 24.4 | 31.025 | 36.45 | 769 | 515 ( 67.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 245 ( 31.9% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaCeranae |
33.03%
|
31.86%
|
n/a | 15.99 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: NosemaCeranae_Notes
Parameter | Content |
---|---|
Column name | NosemaCeranae_Notes |
Description |
Annotations referring to column NosemaCeranae. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaCeranae_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 254 ( 33.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaCeranae_Notes |
66.97%
|
0.39%
|
not available | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: VarroaBees
Parameter | Content |
---|---|
Column name | VarroaBees |
Description |
Attribute referring to column VarroaInfestation: Y (Yes) if 100 bees or more were sampled; N (No) if less than 100 bees were samples. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
VarroaBees | 1 - 2 | n/a | N | n/a | n/a | n/a | Y | 769 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
VarroaBees |
100.00%
|
0.39%
|
Y | ND |
Data Distribution Top 20
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Column: VarroaInfestation
Parameter | Content |
---|---|
Column name | VarroaInfestation |
Description |
Varroa infestation, measured as Varroa infestation rate of adult bees. |
Data type | Decimal number |
Descriptor | pms:varroaInfestationOfAdultBees [UID:0.0.VRRNF468] |
Descriptor description |
The quantity infestation rate of adult honey bee colonies with Varroa mites (Varroa destructor), measured by dislodging Varroa mites from adult honey bees, expressed in number of Varroa mites per unit of honey bees. |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.VRRNF468 |
Unit | mites (100 bees)-1 |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
VarroaInfestation | 1 - 11 | 2.2693610600 | 0 | 0 | 0 | 1.87802759 | 176.9230769 | 769 | 7 ( 0.9% ) | 418 ( 54.4% ) | 0 ( 0.0% ) | 205 ( 26.7% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
VarroaInfestation |
99.09%
|
26.66%
|
0 | 4.226804124 |
Continuous Data Distribution
Completeness
Uniqueness
Column: Varroa_Notes
Parameter | Content |
---|---|
Column name | Varroa_Notes |
Description |
Annotations referring to column VarroaInfestation. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Varroa_Notes | 0 - 2 | n/a | ND | n/a | n/a | n/a | ND | 769 | 762 ( 99.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Varroa_Notes |
0.91%
|
0.26%
|
n/a | ND |
Data Distribution Top 20
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Column: AFBcfu
Parameter | Content |
---|---|
Column name | AFBcfu |
Description |
Not specified by the data provider. Presumably colony forming units, counted appearing in microbiological assays, which are used for the detection of the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Data type | Integer number |
Descriptor | Integer [UID:0.0.NTGER313] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.NTGER313 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFBcfu | 1 - 1 | 0.0 | 0 | 0 | 0 | 0 | 0 | 769 | 756 ( 98.3% ) | 13 ( 1.7% ) | 0 ( 0.0% ) | 2 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFBcfu |
1.69%
|
0.26%
|
0 | 0 |
Data Distribution Top 20
Continuous Data Distribution
Completeness
Uniqueness
Column: AFBcfu_Notes
Parameter | Content |
---|---|
Column name | AFBcfu_Notes |
Description |
Annotations referring to column AFBcfu. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFBcfu_Notes | 0 - 13 | n/a | ND | n/a | n/a | n/a | unknown | 769 | 13 ( 1.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFBcfu_Notes |
98.31%
|
0.52%
|
not available | unknown |
Data Distribution Top 20
Completeness
Uniqueness
Column: NosemaSpores
Parameter | Content |
---|---|
Column name | NosemaSpores |
Description |
Number of the causative agents of Nosemosis of honey bees (Nosema apis, Nosema ceranae), exprtessed in spores per animal. |
Data type | Integer number |
Descriptor | Integer [UID:0.0.NTGER313] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.NTGER313 |
Unit | spores animal-1 |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaSpores | 5 - 8 | 568,959.2 | 25,000 | 125,000 | 225,000 | 425,000 | 15,275,000 | 769 | 540 ( 70.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 53 ( 6.9% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaSpores |
29.78%
|
6.89%
|
150000 | 9000000 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: NosemaSpores_Notes
Parameter | Content |
---|---|
Column name | NosemaSpores_Notes |
Description |
Annotations referring to column NosemaSpores. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file); <25000 (less than 25000 spores per animal). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaSpores_Notes | 0 - 13 | n/a | n/a | n/a | n/a | not availabl… | 769 | 229 ( 29.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaSpores_Notes |
70.22%
|
0.52%
|
not available | <25000 |
Data Distribution Top 20
Completeness
Uniqueness
Column: Malpighamoeba
Parameter | Content |
---|---|
Column name | Malpighamoeba |
Description |
The Cq-value (Ct value) for the infection load witht the causative agent of amoeba disease of honey bees, Malpighamoeba mellificae. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Malpighamoeba | 4 - 11 | 34.461182790 | 20.94 | 31.24 | 35.2 | 38.16 | 40.27 | 769 | 738 ( 96.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 32 ( 4.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Malpighamoeba |
4.03%
|
4.16%
|
n/a | 37.41 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: Malpighamoeba_CT
Parameter | Content |
---|---|
Column name | Malpighamoeba_CT |
Description |
Not specified by the data provider. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Malpighamoeba_CT | 0 - 1 | n/a | N | n/a | n/a | n/a | Y | 769 | 513 ( 66.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Malpighamoeba_CT |
33.29%
|
0.39%
|
n/a | Y |
Data Distribution Top 20
Completeness
Uniqueness
Column: Malpighamoeba_Notes
Parameter | Content |
---|---|
Column name | Malpighamoeba_Notes |
Description |
Annotations referring to column Malpighamoeba. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Malpighamoeba_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 769 | 31 ( 4.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Malpighamoeba_Notes |
95.97%
|
0.39%
|
not available | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: RecordNotes
Parameter | Content |
---|---|
Column name | RecordNotes |
Description |
Notes added by the data provider to specific records in the raw data. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
RecordNotes | 0 - 0 | n/a | n/a | n/a | n/a | 769 | 769 ( 100.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
RecordNotes |
0.00%
|
0.13%
|
n/a | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Table: Field study
Column: dataset
Parameter | Content |
---|---|
Column name | dataset |
Description |
Name of the dataset on the Bee Health Data Portal from which the data was obtained. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
dataset | 37 - 41 | n/a | Tier2 Field… | n/a | n/a | n/a | Tier3 Field… | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 8 ( 0.8% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
dataset |
100.00%
|
0.78%
|
Tier3 Field study B results 2022 for BEEP | Tier2 Field study results 2021 for WR |
Data Distribution Top 20
Completeness
Uniqueness
Column: StudyTierLevel
Parameter | Content |
---|---|
Column name | StudyTierLevel |
Description |
Tier level of the study. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
StudyTierLevel | 6 - 6 | n/a | Tier 2 | n/a | n/a | n/a | Tier 3 | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
StudyTierLevel |
100.00%
|
0.19%
|
Tier 2 | Tier 3 |
Data Distribution Top 20
Completeness
Uniqueness
Column: StudyName
Parameter | Content |
---|---|
Column name | StudyName |
Description |
Name of the study. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
StudyName | 13 - 13 | n/a | Field study… | n/a | n/a | n/a | Field study… | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
StudyName |
100.00%
|
0.19%
|
Field study A | Field study B |
Data Distribution Top 20
Completeness
Uniqueness
Column: year
Parameter | Content |
---|---|
Column name | year |
Description |
Calendar year in which the data was acquired. |
Data type | Integer number |
Descriptor | dwc:year [UID:0.0.YEARA340] |
Descriptor description |
A term from the Darwin Core standard:
|
Descriptor target IRI | http://rs.tdwg.org/dwc/terms/year |
Unit | year |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
year | 4 - 4 | 2,021.7 | 2,021 | 2,021 | 2,022 | 2,022 | 2,022 | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
year |
100.00%
|
0.19%
|
2022 | 2021 |
Data Distribution Top 20
Continuous Data Distribution
Outliers
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Uniqueness
Column: organisation
Parameter | Content |
---|---|
Column name | organisation |
Description |
Not specified by the data provider. Organisation appearing in the name of the dataset. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
organisation | 4 - 4 | n/a | BEEP | n/a | n/a | n/a | BEEP | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1 ( 0.1% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
organisation |
100.00%
|
0.10%
|
BEEP | BEEP |
Data Distribution Top 20
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Uniqueness
Column: V
Parameter | Content |
---|---|
Column name | V |
Description |
Not specified by the data provider. V number appearing in the name of the dataset. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
V | 0 - 2 | n/a | V2 | n/a | n/a | n/a | V3 | 1,029 | 418 ( 40.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
V |
59.38%
|
0.29%
|
n/a | V2 |
Data Distribution Top 20
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Uniqueness
Column: SampleID
Parameter | Content |
---|---|
Column name | SampleID |
Description |
Unique identifier of the sample. |
Data type | String |
Descriptor | dwc:materialSampleID [UID:0.0.MTRLS489] |
Descriptor description |
A term from the Darwin Core standard:
|
Descriptor target IRI | http://rs.tdwg.org/dwc/terms/materialSampleID |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SampleID | 1 - 14 | n/a | 11D2 | n/a | n/a | n/a | yhgpjdya | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 1,025 ( 99.6% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SampleID |
100.00%
|
99.61%
|
GB_1 | _467 |
Completeness
Uniqueness
Column: partner
Parameter | Content |
---|---|
Column name | partner |
Description |
Not specified by the data provider. Presumably the name of the consortium partner, who the provided the data. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
partner | 2 - 13 | n/a | BSOUR | n/a | n/a | n/a | WR | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 16 ( 1.6% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
partner |
100.00%
|
1.55%
|
T3Netherlands | T3 Portugal |
Data Distribution Top 20
Completeness
Uniqueness
Column: season
Parameter | Content |
---|---|
Column name | season |
Description |
Not specified by the data provider. Presumably the season in which the sample was collected. |
Data type | String |
Descriptor | pms:season [UID:0.0.SSONA466] |
Descriptor description |
[...] any of the four arbitrary divisions of the year, characterized chiefly by differences in temperature, precipitation, amount of daylight, and plant growth [...] |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.SSONA466 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
season | 6 - 6 | n/a | autumn | n/a | n/a | n/a | summer | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
season |
100.00%
|
0.29%
|
spring | autumn |
Data Distribution Top 20
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Uniqueness
Column: DWVA
Parameter | Content |
---|---|
Column name | DWVA |
Description |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus A (DWV-A). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVA | 4 - 5 | 29.282 | 6.84 | 26.225 | 31.2 | 35.315 | 38.78 | 1,029 | 728 ( 70.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 270 ( 26.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVA |
29.25%
|
26.24%
|
n/a | 19.93 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: DWVA_Cat
Parameter | Content |
---|---|
Column name | DWVA_Cat |
Description |
Attribute referring to column DWVA, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVA_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVA_Cat |
100.00%
|
0.39%
|
N | H |
Data Distribution Top 20
Completeness
Uniqueness
Column: DWVA_Notes
Parameter | Content |
---|---|
Column name | DWVA_Notes |
Description |
Annotations referring to column DWVA. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVA_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 301 ( 29.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVA_Notes |
70.75%
|
0.19%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: DWVB
Parameter | Content |
---|---|
Column name | DWVB |
Description |
The Cq-value (Ct value) for the infection load with the Deformed Wing Virus B (DWV-B). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVB | 1 - 11 | 23.782359580 | 5.5 | 17.26 | 25.7 | 30.68 | 38.45 | 1,029 | 26 ( 2.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 835 ( 81.1% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVB |
97.47%
|
81.15%
|
n/a | 34.57 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: DWVB_Cat
Parameter | Content |
---|---|
Column name | DWVB_Cat |
Description |
Attribute referring to column DWVB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVB_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVB_Cat |
100.00%
|
0.39%
|
M | N |
Data Distribution Top 20
Completeness
Uniqueness
Column: DWVB_Notes
Parameter | Content |
---|---|
Column name | DWVB_Notes |
Description |
Annotations referring to column DWVB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
DWVB_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 1,003 ( 97.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
DWVB_Notes |
2.53%
|
0.19%
|
n/a | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: ABPV
Parameter | Content |
---|---|
Column name | ABPV |
Description |
The Cq-value (Ct value) for the infection load with the Acute Bee Paralysis Virus (ABPV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ABPV | 2 - 5 | 35.598 | 12 | 35.0475 | 37.025 | 38.4175 | 40 | 1,029 | 745 ( 72.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 213 ( 20.7% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
ABPV |
27.60%
|
20.70%
|
n/a | 35.73 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: ABPV_Cat
Parameter | Content |
---|---|
Column name | ABPV_Cat |
Description |
Attribute referring to column ABPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ABPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 336 ( 32.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
ABPV_Cat |
67.35%
|
0.49%
|
N | H |
Data Distribution Top 20
Completeness
Uniqueness
Column: ABPV_Notes
Parameter | Content |
---|---|
Column name | ABPV_Notes |
Description |
Annotations referring to column ABPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ABPV_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 284 ( 27.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
ABPV_Notes |
72.40%
|
0.29%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: CBPV
Parameter | Content |
---|---|
Column name | CBPV |
Description |
The Cq-value (Ct value) for the infection load with the Chronic Bee Paralysis Virus (CBPV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CBPV | 2 - 5 | 36.181 | 13.31 | 35.04 | 36.985 | 38.4225 | 40 | 1,029 | 737 ( 71.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 221 ( 21.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
CBPV |
28.38%
|
21.48%
|
n/a | 37.61 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: CBPV_Cat
Parameter | Content |
---|---|
Column name | CBPV_Cat |
Description |
Attribute referring to column CBPV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CBPV_Cat | 0 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 337 ( 32.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 5 ( 0.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
CBPV_Cat |
67.25%
|
0.49%
|
N | H |
Data Distribution Top 20
Completeness
Uniqueness
Column: CBPV_Notes
Parameter | Content |
---|---|
Column name | CBPV_Notes |
Description |
Annotations referring to column CBPV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
CBPV_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 292 ( 28.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
CBPV_Notes |
71.62%
|
0.29%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: BQCV
Parameter | Content |
---|---|
Column name | BQCV |
Description |
The Cq-value (Ct value) for the infection load with the Black Queen Cell Virus (BQCV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
BQCV | 2 - 6 | 24.8266 | 9.7 | 22.41 | 24.84 | 27.46 | 37.8 | 1,029 | 2 ( 0.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 743 ( 72.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
BQCV |
99.81%
|
72.21%
|
26.49 | 24.04 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: BQCV_Cat
Parameter | Content |
---|---|
Column name | BQCV_Cat |
Description |
Attribute referring to column BQCV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
BQCV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
BQCV_Cat |
100.00%
|
0.39%
|
M | N |
Data Distribution Top 20
Completeness
Uniqueness
Column: BQCV_Notes
Parameter | Content |
---|---|
Column name | BQCV_Notes |
Description |
Annotations referring to column BQCV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
BQCV_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 1,027 ( 99.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
BQCV_Notes |
0.19%
|
0.19%
|
n/a | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: SBV
Parameter | Content |
---|---|
Column name | SBV |
Description |
The Cq-value (Ct value) for the infection load with the Sackbrood Virus (SBV). |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SBV | 1 - 11 | 26.404416140 | 0 | 24.2175 | 28.12 | 30.81 | 37.51 | 1,029 | 77 ( 7.5% ) | 4 ( 0.4% ) | 0 ( 0.0% ) | 736 ( 71.5% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SBV |
92.52%
|
71.53%
|
n/a | 33.58 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: SBV_Cat
Parameter | Content |
---|---|
Column name | SBV_Cat |
Description |
Attribute referring to column SBV, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). For Virus: L means < 10^4 genome copies, M means between 10^4 and 10^7 genome copies, and H means > 10^7 genome copies per bee. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SBV_Cat | 1 - 1 | n/a | H | n/a | n/a | n/a | N | 1,029 | 0 ( 0.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SBV_Cat |
100.00%
|
0.39%
|
M | L |
Data Distribution Top 20
Completeness
Uniqueness
Column: SBV_Notes
Parameter | Content |
---|---|
Column name | SBV_Notes |
Description |
Annotations referring to column SBV. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
SBV_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 952 ( 92.5% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
SBV_Notes |
7.48%
|
0.19%
|
n/a | negative |
Data Distribution Top 20
Completeness
Uniqueness
Column: EFB
Parameter | Content |
---|---|
Column name | EFB |
Description |
The Cq-value (Ct value) for the infection load witht the causative agent of European Foulbrood of honey bees (EFB), Melissococcus plutonius. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
EFB | 2 - 7 | 34.43597 | 28.42 | 32.4025 | 35.3 | 36.3525 | 37.38 | 1,029 | 1,011 ( 98.3% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 19 ( 1.8% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
EFB |
1.75%
|
1.85%
|
n/a | 37.38 |
Data Distribution Top 20
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: EFB_Cat
Parameter | Content |
---|---|
Column name | EFB_Cat |
Description |
Attribute referring to column EFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
EFB_Cat | 0 - 1 | n/a | L | n/a | n/a | n/a | N | 1,029 | 654 ( 63.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
EFB_Cat |
36.44%
|
0.39%
|
n/a | M |
Data Distribution Top 20
Completeness
Uniqueness
Column: EFB_Notes
Parameter | Content |
---|---|
Column name | EFB_Notes |
Description |
Annotations referring to column EFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
EFB_Notes | 0 - 13 | n/a | ND | n/a | n/a | n/a | not availabl… | 1,029 | 18 ( 1.7% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
EFB_Notes |
98.25%
|
0.39%
|
not available | ND |
Data Distribution Top 20
Completeness
Uniqueness
Column: AFB
Parameter | Content |
---|---|
Column name | AFB |
Description |
The Cq-value (Ct value) for the infection load witht the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFB | 2 - 11 | 36.856439390 | 29.61 | 36.17 | 37.13 | 37.48375 | 40 | 1,029 | 996 ( 96.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 33 ( 3.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFB |
3.21%
|
3.21%
|
n/a | 36.945 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: AFB_Cat
Parameter | Content |
---|---|
Column name | AFB_Cat |
Description |
Attribute referring to column AFB, which is given if different dilutions of a DNA plasmid, containing the target sequence, were added, to provide an estimate of the amount of DNA or RNA present, or if no dilutions were added: L (Low); M (Medium); H (High); N (None). It is not specified if the number of genome copies for th edifferent categories also refer to this column. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFB_Cat | 0 - 1 | n/a | L | n/a | n/a | n/a | N | 1,029 | 696 ( 67.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFB_Cat |
32.36%
|
0.39%
|
n/a | M |
Data Distribution Top 20
Completeness
Uniqueness
Column: AFB_Notes
Parameter | Content |
---|---|
Column name | AFB_Notes |
Description |
Annotations referring to column AFB. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFB_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 33 ( 3.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFB_Notes |
96.79%
|
0.29%
|
not available | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: NosemaApis
Parameter | Content |
---|---|
Column name | NosemaApis |
Description |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema apis. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaApis | 5 - 5 | 22.846 | 17.75 | 19.35 | 21.58 | 26.69 | 32.03 | 1,029 | 1,020 ( 99.1% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 10 ( 1.0% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaApis |
0.87%
|
0.97%
|
n/a | 21.58 |
Data Distribution Top 20
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: NosemaApis_Notes
Parameter | Content |
---|---|
Column name | NosemaApis_Notes |
Description |
Annotations referring to column NosemaApis. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaApis_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 9 ( 0.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaApis_Notes |
99.13%
|
0.29%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: NosemaCeranae
Parameter | Content |
---|---|
Column name | NosemaCeranae |
Description |
The Cq-value (Ct value) for the infection load with one of the causative agents of Nosemosis of honey bees, Nosema ceranae. |
Data type | Decimal number |
Descriptor | pms:quantificationCycle [UID:0.0.QNTFC467] |
Descriptor description |
Depending on the real-time instrument, either threshold cycle (Ct), crossing point (Cp) or a take-off point (Top) are used to refer to the same quantification cycle value (Cq): the fractional PCR cycle at which the target is quantified in a given sample. It was proposed to use the term quantification cycle (Cq) in accordance with the data standard RDML (Real-Time PCR Data Markup Language) |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.QNTFC467 |
Unit | no. |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaCeranae | 2 - 6 | 25.0779 | 14.42 | 20.52 | 23.26 | 30.445 | 37.23 | 1,029 | 768 ( 74.6% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 245 ( 23.8% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaCeranae |
25.36%
|
23.81%
|
n/a | 21.88 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: NosemaCeranae_Notes
Parameter | Content |
---|---|
Column name | NosemaCeranae_Notes |
Description |
Annotations referring to column NosemaCeranae. Negative (signal threshold not exceeded); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaCeranae_Notes | 0 - 13 | n/a | negative | n/a | n/a | n/a | not availabl… | 1,029 | 261 ( 25.4% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaCeranae_Notes |
74.64%
|
0.29%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: VarroaBees
Parameter | Content |
---|---|
Column name | VarroaBees |
Description |
Attribute referring to column VarroaInfestation: Y (Yes) if 100 bees or more were sampled; N (No) if less than 100 bees were samples. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
VarroaBees | 0 - 1 | n/a | N | n/a | n/a | n/a | Y | 1,029 | 2 ( 0.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
VarroaBees |
99.81%
|
0.29%
|
Y | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: VarroaInfestation
Parameter | Content |
---|---|
Column name | VarroaInfestation |
Description |
Varroa infestation, measured as Varroa infestation rate of adult bees. |
Data type | Decimal number |
Descriptor | pms:varroaInfestationOfAdultBees [UID:0.0.VRRNF468] |
Descriptor description |
The quantity infestation rate of adult honey bee colonies with Varroa mites (Varroa destructor), measured by dislodging Varroa mites from adult honey bees, expressed in number of Varroa mites per unit of honey bees. |
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.VRRNF468 |
Unit | mites (100 bees)-1 |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
VarroaInfestation | 1 - 11 | 1.9824686100 | 0 | 0 | 0 | 1.61290322 | 46.90265487 | 1,029 | 2 ( 0.2% ) | 540 ( 52.5% ) | 0 ( 0.0% ) | 300 ( 29.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
VarroaInfestation |
99.81%
|
29.15%
|
0 | 30.86419753 |
Continuous Data Distribution
Completeness
Uniqueness
Column: Varroa_Notes
Parameter | Content |
---|---|
Column name | Varroa_Notes |
Description |
Annotations referring to column VarroaInfestation. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Varroa_Notes | 0 - 2 | n/a | ND | n/a | n/a | n/a | ND | 1,029 | 1,027 ( 99.8% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Varroa_Notes |
0.19%
|
0.19%
|
n/a | ND |
Data Distribution Top 20
Completeness
Uniqueness
Column: AFBcfu
Parameter | Content |
---|---|
Column name | AFBcfu |
Description |
Not specified by the data provider. Presumably colony forming units, counted appearing in microbiological assays, which are used for the detection of the causative agent of American Foulbrood (AFB), Paenibacillus larvae. |
Data type | Integer number |
Descriptor | Integer [UID:0.0.NTGER313] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.NTGER313 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFBcfu | 1 - 1 | 0.1 | 0 | 0 | 0 | 0 | 1 | 1,029 | 1,008 ( 98.0% ) | 19 ( 1.8% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFBcfu |
2.04%
|
0.29%
|
0 | 1 |
Data Distribution Top 20
Continuous Data Distribution
Completeness
Uniqueness
Column: AFBcfu_Notes
Parameter | Content |
---|---|
Column name | AFBcfu_Notes |
Description |
Annotations referring to column AFBcfu. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AFBcfu_Notes | 0 - 13 | n/a | ND | n/a | n/a | n/a | not availabl… | 1,029 | 21 ( 2.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
AFBcfu_Notes |
97.96%
|
0.29%
|
not available | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: NosemaSpores
Parameter | Content |
---|---|
Column name | NosemaSpores |
Description |
Number of the causative agents of Nosemosis of honey bees (Nosema apis, Nosema ceranae), exprtessed in spores per animal. |
Data type | Integer number |
Descriptor | Integer [UID:0.0.NTGER313] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.NTGER313 |
Unit | spores animal-1 |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaSpores | 5 - 7 | 339,712.4 | 25,000 | 68,750 | 150,000 | 375,000 | 4,150,000 | 1,029 | 803 ( 78.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 47 ( 4.6% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaSpores |
21.96%
|
4.57%
|
50000 | 825000 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: NosemaSpores_Notes
Parameter | Content |
---|---|
Column name | NosemaSpores_Notes |
Description |
Annotations referring to column NosemaSpores. ND (meaning not specified by the data provider); not available (data has not been provided in the raw data file); <25000 (less than 25000 spores per animal). |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NosemaSpores_Notes | 0 - 13 | n/a | n/a | n/a | n/a | not availabl… | 1,029 | 226 ( 22.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 4 ( 0.4% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
NosemaSpores_Notes |
78.04%
|
0.39%
|
ND | <25000 |
Data Distribution Top 20
Completeness
Uniqueness
Column: Malpighamoeba
Parameter | Content |
---|---|
Column name | Malpighamoeba |
Description |
The Cq-value (Ct value) for the infection load witht the causative agent of amoeba disease of honey bees, Malpighamoeba mellificae. |
Data type | Decimal number |
Descriptor | DecimalNumber [UID:0.0.DCMLN314] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.DCMLN314 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Malpighamoeba | 4 - 7 | 29.64933 | 9.91 | 23.9275 | 31.63375 | 35.2275 | 42.5 | 1,029 | 947 ( 92.0% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 79 ( 7.7% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Malpighamoeba |
7.97%
|
7.68%
|
n/a | 39.93 |
Continuous Data Distribution
Outliers
Completeness
Uniqueness
Column: Malpighamoeba_CT
Parameter | Content |
---|---|
Column name | Malpighamoeba_CT |
Description |
Not specified by the data provider. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Malpighamoeba_CT | 0 - 1 | n/a | N | n/a | n/a | n/a | Y | 1,029 | 311 ( 30.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 3 ( 0.3% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Malpighamoeba_CT |
69.78%
|
0.29%
|
N | Y |
Data Distribution Top 20
Completeness
Uniqueness
Column: Malpighamoeba_Notes
Parameter | Content |
---|---|
Column name | Malpighamoeba_Notes |
Description |
Annotations referring to column Malpighamoeba. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Malpighamoeba_Notes | 0 - 8 | n/a | negative | n/a | n/a | n/a | negative | 1,029 | 393 ( 38.2% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
Malpighamoeba_Notes |
61.81%
|
0.19%
|
negative | n/a |
Data Distribution Top 20
Completeness
Uniqueness
Column: RecordNotes
Parameter | Content |
---|---|
Column name | RecordNotes |
Description |
Notes added by the data provider to specific records in the raw data. |
Data type | String |
Descriptor | Text [UID:0.0.TEXTA315] |
Descriptor description |
|
Descriptor target IRI | https://app.pollinatorhub.eu/vocabulary/descriptors/0.0.TEXTA315 |
Unit | n/a |
Column Name | Range | Mean | Minimum | Q1 | Median | Q3 | Maximum | Total | Missing | Zero | Blank | Distinct |
---|---|---|---|---|---|---|---|---|---|---|---|---|
RecordNotes | 0 - 122 | n/a | these codes… | n/a | n/a | n/a | these codes… | 1,029 | 966 ( 93.9% ) | 0 ( 0.0% ) | 0 ( 0.0% ) | 2 ( 0.2% ) |
Column Name | Completeness | Uniqueness | Most Common Value | Least Common Value |
---|---|---|---|---|
RecordNotes |
6.12%
|
0.19%
|
n/a | these codes [column SampleID] might be wrong, as they could not be uploaded onto the BEEP app, or there was no code at all |